bump

* mistake: was using the install dir instead of binary dir
* was also using INCLUDE_INSTALL_DIR before it was set, so on a first cmake run, the pkgconfig file was bad

.hgignore

@@ -20,4 +20,5 @@ CMakeCache.txt
 tags
 .*.swp
 activity.png
-gmon.out
+*.out
+*.php*

CMakeLists.txt

@@ -1,7 +1,13 @@
 project(Eigen)
 cmake_minimum_required(VERSION 2.6.2)
 
-set(EIGEN_VERSION_NUMBER "2.0.6")
+set(INCLUDE_INSTALL_DIR
+    "${CMAKE_INSTALL_PREFIX}/include/eigen2"
+    CACHE PATH
+    "The directory where we install the header files"
+    FORCE)
+
+set(EIGEN_VERSION_NUMBER "2.0.9")
 set(EIGEN_VERSION "${EIGEN_VERSION_NUMBER}")
 
 set(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake)
@@ -12,6 +18,9 @@ if(NOT WIN32)
   option(EIGEN_BUILD_LIB "Build the binary shared library" OFF)
 endif(NOT WIN32)
 option(EIGEN_BUILD_BTL "Build benchmark suite" OFF)
+if(NOT WIN32)
+  option(EIGEN_BUILD_PKGCONFIG "Build pkg-config .pc file for Eigen" ON)
+endif(NOT WIN32)
 
 if(EIGEN_BUILD_LIB)
   option(EIGEN_TEST_LIB "Build the unit tests using the library (disable -pedantic)" OFF)
@@ -21,7 +30,12 @@ set(CMAKE_INCLUDE_CURRENT_DIR ON)
 
 if(CMAKE_COMPILER_IS_GNUCXX)
   if(CMAKE_SYSTEM_NAME MATCHES Linux)
-    set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wnon-virtual-dtor -Wno-long-long -ansi -Wundef -Wcast-align -Wchar-subscripts -Wall -W -Wpointer-arith -Wwrite-strings -Wformat-security -Wextra -fno-exceptions -fno-check-new -fno-common -fstrict-aliasing")
+    include(CheckCXXCompilerFlag)
+    set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wnon-virtual-dtor -Wno-long-long -ansi -Wundef -Wcast-align -Wchar-subscripts -Wall -W -Wpointer-arith -Wwrite-strings -Wformat-security -fno-exceptions -fno-check-new -fno-common -fstrict-aliasing")
+    check_cxx_compiler_flag("-Wextra" has_wextra)
+    if(has_wextra)
+      set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wextra")
+    endif()
     if(NOT EIGEN_TEST_LIB)
       set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pedantic")
     endif(NOT EIGEN_TEST_LIB)
@@ -71,6 +85,13 @@ endif(EIGEN_TEST_NO_EXPLICIT_VECTORIZATION)
 
 include_directories(${CMAKE_CURRENT_SOURCE_DIR} ${CMAKE_CURRENT_BINARY_DIR})
 
+if(EIGEN_BUILD_PKGCONFIG)
+    configure_file(eigen2.pc.in eigen2.pc) # uses INCLUDE_INSTALL_DIR
+    install(FILES ${CMAKE_CURRENT_BINARY_DIR}/eigen2.pc
+        DESTINATION lib/pkgconfig
+        )
+endif(EIGEN_BUILD_PKGCONFIG)
+
 add_subdirectory(Eigen)
 add_subdirectory(unsupported)
 

Eigen/CMakeLists.txt

@@ -1,4 +1,6 @@
-set(Eigen_HEADERS Core LU Cholesky QR Geometry Sparse Array SVD LeastSquares QtAlignedMalloc StdVector)
+set(Eigen_HEADERS Core LU Cholesky QR Geometry
+                  Sparse Array SVD LeastSquares
+                  QtAlignedMalloc StdVector NewStdVector)
 
 if(EIGEN_BUILD_LIB)
     set(Eigen_SRCS
@@ -20,12 +22,6 @@ if(CMAKE_COMPILER_IS_GNUCXX)
     set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "${CMAKE_CXX_FLAGS_RELWITHDEBINFO} -g1 -O2")
 endif(CMAKE_COMPILER_IS_GNUCXX)
 
-set(INCLUDE_INSTALL_DIR
-    "${CMAKE_INSTALL_PREFIX}/include/eigen2"
-    CACHE PATH
-    "The directory where we install the header files"
-    FORCE)
-
 install(FILES
   ${Eigen_HEADERS}
   DESTINATION ${INCLUDE_INSTALL_DIR}/Eigen

Eigen/QtAlignedMalloc

@@ -1,10 +1,23 @@
-
 #ifndef EIGEN_QTMALLOC_MODULE_H
 #define EIGEN_QTMALLOC_MODULE_H
 
+#if (!EIGEN_MALLOC_ALREADY_ALIGNED)
+
+#ifdef QVECTOR_H
+#error You must include <Eigen/QtAlignedMalloc> before <QtCore/QVector>.
+#endif                                           
+
+#ifdef Q_DECL_IMPORT
+  #define Q_DECL_IMPORT_ORIG Q_DECL_IMPORT
+  #undef Q_DECL_IMPORT
+  #define Q_DECL_IMPORT
+#else
+  #define Q_DECL_IMPORT
+#endif
+
 #include "Core"
 
-#if (!EIGEN_MALLOC_ALREADY_ALIGNED)
+#include <QtCore/QVector>
 
 inline void *qMalloc(size_t size)
 {
@@ -26,4 +39,11 @@ inline void *qRealloc(void *ptr, size_t size)
 
 #endif
 
+#ifdef Q_DECL_IMPORT_ORIG
+  #define Q_DECL_IMPORT Q_DECL_IMPORT_ORIG
+  #undef Q_DECL_IMPORT_ORIG
+#else
+  #undef Q_DECL_IMPORT
+#endif
+
 #endif // EIGEN_QTMALLOC_MODULE_H

Eigen/StdVector

@@ -144,4 +144,4 @@ class vector<T,DummyAlloc,true>
 
 #endif // EIGEN_STDVECTOR_MODULE_H
 
-#endif // EIGEN_USE_NEW_STDVECTOR
+#endif // EIGEN_USE_NEW_STDVECTOR

Eigen/src/Array/Functors.h

@@ -43,6 +43,8 @@ struct ei_scalar_add_op {
   inline const PacketScalar packetOp(const PacketScalar& a) const
   { return ei_padd(a, ei_pset1(m_other)); }
   const Scalar m_other;
+private:
+  ei_scalar_add_op& operator=(const ei_scalar_add_op&);
 };
 template<typename Scalar>
 struct ei_functor_traits<ei_scalar_add_op<Scalar> >
@@ -138,6 +140,8 @@ struct ei_scalar_pow_op {
   inline ei_scalar_pow_op(const Scalar& exponent) : m_exponent(exponent) {}
   inline Scalar operator() (const Scalar& a) const { return ei_pow(a, m_exponent); }
   const Scalar m_exponent;
+private:
+  ei_scalar_pow_op& operator=(const ei_scalar_pow_op&);
 };
 template<typename Scalar>
 struct ei_functor_traits<ei_scalar_pow_op<Scalar> >

Eigen/src/Array/PartialRedux.h

@@ -133,6 +133,8 @@ struct ei_member_redux {
   inline result_type operator()(const MatrixBase<Derived>& mat) const
   { return mat.redux(m_functor); }
   const BinaryOp m_functor;
+private:
+  ei_member_redux& operator=(const ei_member_redux&);
 };
 
 /** \array_module \ingroup Array
@@ -290,6 +292,9 @@ template<typename ExpressionType, int Direction> class PartialRedux
 
   protected:
     ExpressionTypeNested m_matrix;
+
+  private:
+    PartialRedux& operator=(const PartialRedux&);
 };
 
 /** \array_module

Eigen/src/Core/CommaInitializer.h

@@ -116,6 +116,9 @@ struct CommaInitializer
   int m_row;              // current row id
   int m_col;              // current col id
   int m_currentBlockRows; // current block height
+
+private:
+  CommaInitializer& operator=(const CommaInitializer&);
 };
 
 /** \anchor MatrixBaseCommaInitRef

Eigen/src/Core/Cwise.h

@@ -178,6 +178,9 @@ template<typename ExpressionType> class Cwise
 
   protected:
     ExpressionTypeNested m_matrix;
+
+  private:
+    Cwise& operator=(const Cwise&);
 };
 
 /** \returns a Cwise wrapper of *this providing additional coefficient-wise operations

Eigen/src/Core/Flagged.h

@@ -109,6 +109,9 @@ template<typename ExpressionType, unsigned int Added, unsigned int Removed> clas
 
   protected:
     ExpressionTypeNested m_matrix;
+
+private:
+  Flagged& operator=(const Flagged&);
 };
 
 /** \returns an expression of *this with added flags

Eigen/src/Core/Functors.h

@@ -279,6 +279,8 @@ struct ei_scalar_multiple_op {
   EIGEN_STRONG_INLINE const PacketScalar packetOp(const PacketScalar& a) const
   { return ei_pmul(a, ei_pset1(m_other)); }
   const Scalar m_other;
+private:
+  ei_scalar_multiple_op& operator=(const ei_scalar_multiple_op&);
 };
 template<typename Scalar>
 struct ei_functor_traits<ei_scalar_multiple_op<Scalar> >
@@ -294,6 +296,8 @@ struct ei_scalar_quotient1_impl {
   EIGEN_STRONG_INLINE const PacketScalar packetOp(const PacketScalar& a) const
   { return ei_pmul(a, ei_pset1(m_other)); }
   const Scalar m_other;
+private:
+  ei_scalar_quotient1_impl& operator=(const ei_scalar_quotient1_impl&);
 };
 template<typename Scalar>
 struct ei_functor_traits<ei_scalar_quotient1_impl<Scalar,true> >
@@ -306,6 +310,8 @@ struct ei_scalar_quotient1_impl<Scalar,false> {
   EIGEN_STRONG_INLINE ei_scalar_quotient1_impl(const Scalar& other) : m_other(other) {}
   EIGEN_STRONG_INLINE Scalar operator() (const Scalar& a) const { return a / m_other; }
   const Scalar m_other;
+private:
+  ei_scalar_quotient1_impl& operator=(const ei_scalar_quotient1_impl&);
 };
 template<typename Scalar>
 struct ei_functor_traits<ei_scalar_quotient1_impl<Scalar,false> >
@@ -323,6 +329,8 @@ template<typename Scalar>
 struct ei_scalar_quotient1_op : ei_scalar_quotient1_impl<Scalar, NumTraits<Scalar>::HasFloatingPoint > {
   EIGEN_STRONG_INLINE ei_scalar_quotient1_op(const Scalar& other)
     : ei_scalar_quotient1_impl<Scalar, NumTraits<Scalar>::HasFloatingPoint >(other) {}
+private:
+  ei_scalar_quotient1_op& operator=(const ei_scalar_quotient1_op&);
 };
 
 // nullary functors
@@ -335,6 +343,8 @@ struct ei_scalar_constant_op {
   EIGEN_STRONG_INLINE const Scalar operator() (int, int = 0) const { return m_other; }
   EIGEN_STRONG_INLINE const PacketScalar packetOp() const { return ei_pset1(m_other); }
   const Scalar m_other;
+private:
+  ei_scalar_constant_op& operator=(const ei_scalar_constant_op&);
 };
 template<typename Scalar>
 struct ei_functor_traits<ei_scalar_constant_op<Scalar> >

Eigen/src/Core/MapBase.h

@@ -66,11 +66,11 @@ template<typename Derived> class MapBase
     inline const Scalar* data() const { return m_data; }
 
     template<bool IsForceAligned,typename Dummy> struct force_aligned_impl {
-      AlignedDerivedType static run(MapBase& a) { return a.derived(); }
+      static AlignedDerivedType run(MapBase& a) { return a.derived(); }
     };
 
     template<typename Dummy> struct force_aligned_impl<false,Dummy> {
-      AlignedDerivedType static run(MapBase& a) { return a.derived()._convertToForceAligned(); }
+      static AlignedDerivedType run(MapBase& a) { return a.derived()._convertToForceAligned(); }
     };
 
     /** \returns an expression equivalent to \c *this but having the \c PacketAccess constant

Eigen/src/Core/Matrix.h

@@ -505,7 +505,9 @@ class Matrix
     template<typename OtherDerived>
     EIGEN_STRONG_INLINE Matrix& _set(const MatrixBase<OtherDerived>& other)
     {
-      _set_selector(other.derived(), typename ei_meta_if<bool(int(OtherDerived::Flags) & EvalBeforeAssigningBit), ei_meta_true, ei_meta_false>::ret());
+      // this enum introduced to fix compilation with gcc 3.3
+      enum { cond = int(OtherDerived::Flags) & EvalBeforeAssigningBit };
+      _set_selector(other.derived(), typename ei_meta_if<bool(cond), ei_meta_true, ei_meta_false>::ret());
       return *this;
     }
 

Eigen/src/Core/NestByValue.h

@@ -100,6 +100,9 @@ template<typename ExpressionType> class NestByValue
 
   protected:
     const ExpressionType m_expression;
+
+  private:
+    NestByValue& operator=(const NestByValue&);
 };
 
 /** \returns an expression of the temporary version of *this.

Eigen/src/Core/Part.h

@@ -124,8 +124,10 @@ template<typename MatrixType, unsigned int Mode> class Part
     }
 
   protected:
-
     const typename MatrixType::Nested m_matrix;
+
+  private:
+    Part& operator=(const Part&);
 };
 
 /** \nonstableyet

Eigen/src/Core/Swap.h

@@ -117,6 +117,9 @@ template<typename ExpressionType> class SwapWrapper
 
   protected:
     ExpressionType& m_expression;
+
+  private:
+    SwapWrapper& operator=(const SwapWrapper&);
 };
 
 /** swaps *this with the expression \a other.

Eigen/src/Core/util/Macros.h

@@ -30,7 +30,7 @@
 
 #define EIGEN_WORLD_VERSION 2
 #define EIGEN_MAJOR_VERSION 0
-#define EIGEN_MINOR_VERSION 6
+#define EIGEN_MINOR_VERSION 9
 
 #define EIGEN_VERSION_AT_LEAST(x,y,z) (EIGEN_WORLD_VERSION>x || (EIGEN_WORLD_VERSION>=x && \
                                       (EIGEN_MAJOR_VERSION>y || (EIGEN_MAJOR_VERSION>=y && \

Eigen/src/Core/util/Memory.h

@@ -1,5 +1,5 @@
 // This file is part of Eigen, a lightweight C++ template library
-// for linear algebra. Eigen itself is part of the KDE project.
+// for linear algebra.
 //
 // Copyright (C) 2008 Gael Guennebaud <g.gael@free.fr>
 // Copyright (C) 2008-2009 Benoit Jacob <jacob.benoit.1@gmail.com>
@@ -27,7 +27,17 @@
 #ifndef EIGEN_MEMORY_H
 #define EIGEN_MEMORY_H
 
-#if defined(__APPLE__) || defined(_WIN64)
+// FreeBSD 6 seems to have 16-byte aligned malloc
+// See http://svn.freebsd.org/viewvc/base/stable/6/lib/libc/stdlib/malloc.c?view=markup
+// FreeBSD 7 seems to have 16-byte aligned malloc except on ARM and MIPS architectures
+// See http://svn.freebsd.org/viewvc/base/stable/7/lib/libc/stdlib/malloc.c?view=markup
+#if defined(__FreeBSD__) && !defined(__arm__) && !defined(__mips__)
+#define EIGEN_FREEBSD_MALLOC_ALREADY_ALIGNED 1
+#else
+#define EIGEN_FREEBSD_MALLOC_ALREADY_ALIGNED 0
+#endif
+
+#if defined(__APPLE__) || defined(_WIN64) || EIGEN_FREEBSD_MALLOC_ALREADY_ALIGNED
   #define EIGEN_MALLOC_ALREADY_ALIGNED 1
 #else
   #define EIGEN_MALLOC_ALREADY_ALIGNED 0
@@ -65,7 +75,7 @@ inline void ei_handmade_aligned_free(void *ptr)
 }
 
 /** \internal allocates \a size bytes. The returned pointer is guaranteed to have 16 bytes alignment.
-  * On allocation error, the returned pointer is undefined, but if exceptions are enabled then a std::bad_alloc is thrown.
+  * On allocation error, the returned pointer is null, and if exceptions are enabled then a std::bad_alloc is thrown.
   */
 inline void* ei_aligned_malloc(size_t size)
 {
@@ -96,7 +106,7 @@ inline void* ei_aligned_malloc(size_t size)
 }
 
 /** allocates \a size bytes. If Align is true, then the returned ptr is 16-byte-aligned.
-  * On allocation error, the returned pointer is undefined, but if exceptions are enabled then a std::bad_alloc is thrown.
+  * On allocation error, the returned pointer is null, and if exceptions are enabled then a std::bad_alloc is thrown.
   */
 template<bool Align> inline void* ei_conditional_aligned_malloc(size_t size)
 {
@@ -116,20 +126,29 @@ template<> inline void* ei_conditional_aligned_malloc<false>(size_t size)
   return result;
 }
 
+/** \internal construct the elements of an array.
+  * The \a size parameter tells on how many objects to call the constructor of T.
+  */
+template<typename T> inline T* ei_construct_elements_of_array(T *ptr, size_t size)
+{
+  for (size_t i=0; i < size; ++i) ::new (ptr + i) T;
+  return ptr;
+}
+
 /** allocates \a size objects of type T. The returned pointer is guaranteed to have 16 bytes alignment.
   * On allocation error, the returned pointer is undefined, but if exceptions are enabled then a std::bad_alloc is thrown.
   * The default constructor of T is called.
   */
 template<typename T> inline T* ei_aligned_new(size_t size)
 {
-  void *void_result = ei_aligned_malloc(sizeof(T)*size);
-  return ::new(void_result) T[size];
+  T *result = reinterpret_cast<T*>(ei_aligned_malloc(sizeof(T)*size));
+  return ei_construct_elements_of_array(result, size);
 }
 
 template<typename T, bool Align> inline T* ei_conditional_aligned_new(size_t size)
 {
-  void *void_result = ei_conditional_aligned_malloc<Align>(sizeof(T)*size);
-  return ::new(void_result) T[size];
+  T *result = reinterpret_cast<T*>(ei_conditional_aligned_malloc<Align>(sizeof(T)*size));
+  return ei_construct_elements_of_array(result, size);
 }
 
 /** \internal free memory allocated with ei_aligned_malloc
@@ -163,10 +182,10 @@ template<> inline void ei_conditional_aligned_free<false>(void *ptr)
   free(ptr);
 }
 
-/** \internal delete the elements of an array.
+/** \internal destruct the elements of an array.
   * The \a size parameters tells on how many objects to call the destructor of T.
   */
-template<typename T> inline void ei_delete_elements_of_array(T *ptr, size_t size)
+template<typename T> inline void ei_destruct_elements_of_array(T *ptr, size_t size)
 {
   // always destruct an array starting from the end.
   while(size) ptr[--size].~T();
@@ -177,7 +196,7 @@ template<typename T> inline void ei_delete_elements_of_array(T *ptr, size_t size
   */
 template<typename T> inline void ei_aligned_delete(T *ptr, size_t size)
 {
-  ei_delete_elements_of_array<T>(ptr, size);
+  ei_destruct_elements_of_array<T>(ptr, size);
   ei_aligned_free(ptr);
 }
 
@@ -186,7 +205,7 @@ template<typename T> inline void ei_aligned_delete(T *ptr, size_t size)
   */
 template<typename T, bool Align> inline void ei_conditional_aligned_delete(T *ptr, size_t size)
 {
-  ei_delete_elements_of_array<T>(ptr, size);
+  ei_destruct_elements_of_array<T>(ptr, size);
   ei_conditional_aligned_free<Align>(ptr);
 }
 
@@ -225,8 +244,8 @@ inline static int ei_alignmentOffset(const Scalar* ptr, int maxOffset)
   #define ei_aligned_stack_free(PTR,SIZE) ei_aligned_free(PTR)
 #endif
 
-#define ei_aligned_stack_new(TYPE,SIZE) ::new(ei_aligned_stack_alloc(sizeof(TYPE)*SIZE)) TYPE[SIZE]
-#define ei_aligned_stack_delete(TYPE,PTR,SIZE) do {ei_delete_elements_of_array<TYPE>(PTR, SIZE); \
+#define ei_aligned_stack_new(TYPE,SIZE) ei_construct_elements_of_array(reinterpret_cast<TYPE*>(ei_aligned_stack_alloc(sizeof(TYPE)*SIZE)), SIZE)
+#define ei_aligned_stack_delete(TYPE,PTR,SIZE) do {ei_destruct_elements_of_array<TYPE>(PTR, SIZE); \
                                                    ei_aligned_stack_free(PTR,sizeof(TYPE)*SIZE);} while(0)
 
 
@@ -244,7 +263,7 @@ inline static int ei_alignmentOffset(const Scalar* ptr, int maxOffset)
         return Eigen::ei_conditional_aligned_malloc<NeedsToAlign>(size); \
       }
   #endif
-  
+
   #define EIGEN_MAKE_ALIGNED_OPERATOR_NEW_IF(NeedsToAlign) \
       void *operator new(size_t size) { \
         return Eigen::ei_conditional_aligned_malloc<NeedsToAlign>(size); \

Eigen/src/Core/util/XprHelper.h

@@ -37,6 +37,10 @@
 //classes inheriting ei_no_assignment_operator don't generate a default operator=.
 class ei_no_assignment_operator
 {
+#if EIGEN_GCC3_OR_OLDER
+  protected:
+    void nevermind_this_is_just_to_work_around_a_stupid_gcc3_warning();
+#endif
   private:
     ei_no_assignment_operator& operator=(const ei_no_assignment_operator&);
 };

Eigen/src/SVD/SVD.h

@@ -61,6 +61,8 @@ template<typename MatrixType> class SVD
 
   public:
 
+    SVD() {} // a user who relied on compiler-generated default compiler reported problems with MSVC in 2.0.7
+    
     SVD(const MatrixType& matrix)
       : m_matU(matrix.rows(), std::min(matrix.rows(), matrix.cols())),
         m_matV(matrix.cols(),matrix.cols()),
@@ -107,6 +109,8 @@ void SVD<MatrixType>::compute(const MatrixType& matrix)
   const int m = matrix.rows();
   const int n = matrix.cols();
   const int nu = std::min(m,n);
+  ei_assert(m>=n && "In Eigen 2.0, SVD only works for MxN matrices with M>=N. Sorry!");
+  ei_assert(m>1 && "In Eigen 2.0, SVD doesn't work on 1x1 matrices");
 
   m_matU.resize(m, nu);
   m_matU.setZero();

Eigen/src/Sparse/AmbiVector.h

@@ -99,6 +99,8 @@ template<typename _Scalar> class AmbiVector
       allocSize = allocSize/sizeof(Scalar) + (allocSize%sizeof(Scalar)>0?1:0);
       Scalar* newBuffer = new Scalar[allocSize];
       memcpy(newBuffer,  m_buffer,  copyElements * sizeof(ListEl));
+      delete[] m_buffer;
+      m_buffer = newBuffer;
     }
 
   protected:
@@ -238,8 +240,11 @@ Scalar& AmbiVector<Scalar>::coeffRef(int i)
       else
       {
         if (m_llSize>=m_allocatedElements)
+        {
           reallocateSparse();
-        ei_internal_assert(m_llSize<m_size && "internal error: overflow in sparse mode");
+          llElements = reinterpret_cast<ListEl*>(m_buffer);
+        }
+        ei_internal_assert(m_llSize<m_allocatedElements && "internal error: overflow in sparse mode");
         // let's insert a new coefficient
         ListEl& el = llElements[m_llSize];
         el.value = Scalar(0);
@@ -365,6 +370,9 @@ class AmbiVector<_Scalar>::Iterator
     int m_cachedIndex;          // current coordinate
     Scalar m_cachedValue;       // current value
     bool m_isDense;             // mode of the vector
+
+  private:
+    Iterator& operator=(const Iterator&);
 };
 
 

Eigen/src/Sparse/DynamicSparseMatrix.h

@@ -289,9 +289,11 @@ class DynamicSparseMatrix<Scalar,_Flags>::InnerIterator : public SparseVector<Sc
     inline int row() const { return IsRowMajor ? m_outer : Base::index(); }
     inline int col() const { return IsRowMajor ? Base::index() : m_outer; }
 
-
   protected:
     const int m_outer;
+
+  private:
+    InnerIterator& operator=(const InnerIterator&);
 };
 
 #endif // EIGEN_DYNAMIC_SPARSEMATRIX_H

Eigen/src/Sparse/SparseBlock.h

@@ -53,6 +53,9 @@ class SparseInnerVectorSet : ei_no_assignment_operator,
         inline InnerIterator(const SparseInnerVectorSet& xpr, int outer)
           : MatrixType::InnerIterator(xpr.m_matrix, xpr.m_outerStart + outer)
         {}
+
+      private:
+        InnerIterator& operator=(const InnerIterator&);
     };
 
     inline SparseInnerVectorSet(const MatrixType& matrix, int outerStart, int outerSize)
@@ -110,6 +113,8 @@ class SparseInnerVectorSet<DynamicSparseMatrix<_Scalar, _Options>, Size>
         inline InnerIterator(const SparseInnerVectorSet& xpr, int outer)
           : MatrixType::InnerIterator(xpr.m_matrix, xpr.m_outerStart + outer)
         {}
+      private:
+        InnerIterator& operator=(const InnerIterator&);
     };
 
     inline SparseInnerVectorSet(const MatrixType& matrix, int outerStart, int outerSize)

Eigen/src/Sparse/SparseCwise.h

@@ -156,6 +156,9 @@ template<typename ExpressionType> class SparseCwise
 
   protected:
     ExpressionTypeNested m_matrix;
+
+  private:
+    SparseCwise& operator=(const SparseCwise&);
 };
 
 template<typename Derived>

Eigen/src/Sparse/SparseCwiseBinaryOp.h

@@ -126,6 +126,8 @@ class SparseCwiseBinaryOp<BinaryOp,Lhs,Rhs>::InnerIterator
     EIGEN_STRONG_INLINE InnerIterator(const SparseCwiseBinaryOp& binOp, int outer)
       : Base(binOp,outer)
     {}
+  private:
+    InnerIterator& operator=(const InnerIterator&);
 };
 
 /***************************************************************************
@@ -197,6 +199,9 @@ class ei_sparse_cwise_binary_op_inner_iterator_selector<BinaryOp, Lhs, Rhs, Deri
     const BinaryOp& m_functor;
     Scalar m_value;
     int m_id;
+
+  private:
+    ei_sparse_cwise_binary_op_inner_iterator_selector& operator=(const ei_sparse_cwise_binary_op_inner_iterator_selector&);
 };
 
 // sparse - sparse  (product)
@@ -250,6 +255,9 @@ class ei_sparse_cwise_binary_op_inner_iterator_selector<ei_scalar_product_op<T>,
     LhsIterator m_lhsIter;
     RhsIterator m_rhsIter;
     const BinaryFunc& m_functor;
+
+  private:
+    ei_sparse_cwise_binary_op_inner_iterator_selector& operator=(const ei_sparse_cwise_binary_op_inner_iterator_selector&);
 };
 
 // sparse - dense  (product)
@@ -290,6 +298,9 @@ class ei_sparse_cwise_binary_op_inner_iterator_selector<ei_scalar_product_op<T>,
     LhsIterator m_lhsIter;
     const BinaryFunc m_functor;
     const int m_outer;
+
+  private:
+    ei_sparse_cwise_binary_op_inner_iterator_selector& operator=(const ei_sparse_cwise_binary_op_inner_iterator_selector&);
 };
 
 // sparse - dense  (product)

Eigen/src/Sparse/SparseCwiseUnaryOp.h

@@ -90,6 +90,9 @@ class SparseCwiseUnaryOp<UnaryOp,MatrixType>::InnerIterator
   protected:
     MatrixTypeIterator m_iter;
     const UnaryOp m_functor;
+
+  private:
+    InnerIterator& operator=(const InnerIterator&);
 };
 
 template<typename Derived>

Eigen/src/Sparse/SparseDiagonalProduct.h

@@ -120,6 +120,8 @@ class ei_sparse_diagonal_product_inner_iterator_selector
               const SparseDiagonalProductType& expr, int outer)
       : Base(expr.rhs().innerVector(outer) .cwise()* expr.lhs().diagonal(), 0)
     {}
+  private:
+    ei_sparse_diagonal_product_inner_iterator_selector& operator=(const ei_sparse_diagonal_product_inner_iterator_selector&);
 };
 
 template<typename Lhs, typename Rhs, typename SparseDiagonalProductType>

Eigen/src/Sparse/SparseFlagged.h

@@ -64,16 +64,21 @@ template<typename ExpressionType, unsigned int Added, unsigned int Removed> clas
 
   protected:
     ExpressionTypeNested m_matrix;
+
+  private:
+    SparseFlagged& operator=(const SparseFlagged&);
 };
 
 template<typename ExpressionType, unsigned int Added, unsigned int Removed>
   class SparseFlagged<ExpressionType,Added,Removed>::InnerIterator : public ExpressionType::InnerIterator
 {
   public:
-
     EIGEN_STRONG_INLINE InnerIterator(const SparseFlagged& xpr, int outer)
       : ExpressionType::InnerIterator(xpr.m_matrix, outer)
     {}
+
+  private:
+    InnerIterator& operator=(const InnerIterator&);
 };
 
 template<typename ExpressionType, unsigned int Added, unsigned int Removed>

Eigen/src/Sparse/SparseMatrix.h

@@ -259,19 +259,21 @@ class SparseMatrix
       m_data.resize(k,0);
     }
 
+    /** Resizes the matrix to a \a rows x \a cols matrix and initializes it to zero
+      * \sa resizeNonZeros(int), reserve(), setZero()
+      */
     void resize(int rows, int cols)
     {
-//       std::cerr << this << " resize " << rows << "x" << cols << "\n";
       const int outerSize = IsRowMajor ? rows : cols;
       m_innerSize = IsRowMajor ? cols : rows;
       m_data.clear();
-      if (m_outerSize != outerSize)
+      if (m_outerSize != outerSize || m_outerSize==0)
       {
         delete[] m_outerIndex;
         m_outerIndex = new int [outerSize+1];
         m_outerSize = outerSize;
-        memset(m_outerIndex, 0, (m_outerSize+1)*sizeof(int));
       }
+      memset(m_outerIndex, 0, (m_outerSize+1)*sizeof(int));
     }
     void resizeNonZeros(int size)
     {
@@ -442,6 +444,9 @@ class SparseMatrix<Scalar,_Flags>::InnerIterator
     int m_id;
     const int m_start;
     const int m_end;
+
+  private:
+    InnerIterator& operator=(const InnerIterator&);
 };
 
 #endif // EIGEN_SPARSEMATRIX_H

Eigen/src/Sparse/SparseTranspose.h

@@ -62,15 +62,20 @@ template<typename MatrixType> class SparseTranspose
 
   protected:
     const typename MatrixType::Nested m_matrix;
+
+  private:
+    SparseTranspose& operator=(const SparseTranspose&);
 };
 
 template<typename MatrixType> class SparseTranspose<MatrixType>::InnerIterator : public MatrixType::InnerIterator
 {
   public:
-
     EIGEN_STRONG_INLINE InnerIterator(const SparseTranspose& trans, int outer)
       : MatrixType::InnerIterator(trans.m_matrix, outer)
     {}
+
+  private:
+    InnerIterator& operator=(const InnerIterator&);
 };
 
 template<typename MatrixType> class SparseTranspose<MatrixType>::ReverseInnerIterator : public MatrixType::ReverseInnerIterator

Eigen/src/Sparse/SparseVector.h

@@ -360,6 +360,9 @@ class SparseVector<Scalar,_Flags>::InnerIterator
     const CompressedStorage<Scalar>& m_data;
     int m_id;
     const int m_end;
+
+  private:
+    InnerIterator& operator=(const InnerIterator&);
 };
 
 #endif // EIGEN_SPARSEVECTOR_H

doc/CustomizingEigen.dox

@@ -81,7 +81,7 @@ In order to add support for a custom type \c T you need:
  3 - define a couple of math functions for your type such as: ei_sqrt, ei_abs, etc...
      (see the file Eigen/src/Core/MathFunctions.h)
 
-Here is a concrete example adding support for the Adolc's \c adouble type. <a href="http://www.math.tu-dresden.de/~adol-c/">Adolc</a> is an automatic differentiation library. The type \c adouble is basically a real value tracking the values of any number of partial derivatives.
+Here is a concrete example adding support for the Adolc's \c adouble type. <a href="https://projects.coin-or.org/ADOL-C">Adolc</a> is an automatic differentiation library. The type \c adouble is basically a real value tracking the values of any number of partial derivatives.
 
 \code
 #ifndef ADLOCSUPPORT_H

eigen2.pc.in

@@ -0,0 +1,7 @@
+
+Name: Eigen2
+Description: A C++ template library for linear algebra: vectors, matrices, and related algorithms
+Requires:
+Version: ${EIGEN_VERSION_NUMBER}
+Libs:
+Cflags: -I${INCLUDE_INSTALL_DIR}

scripts/eigen_gen_docs

@@ -4,18 +4,17 @@
 # TODO : display error msg on stderr instead of stdout
 
 # configuration
-USER='orzel'
+# You should call this script with USER set as you want, else some default
+# will be used
+USER=${USER:-'orzel'}
 
-# step 1 : update
-hg pull -u || (echo "update failed"; exit 1)
-
-# step 2 : build
+# step 1 : build
 # todo if 'build is not there, create one:
 #mkdir build
 (cd build && cmake .. && make -j3 doc) || (echo "make failed"; exit 1)
 #todo: n+1 where n = number of cpus
 
-#step 3 : upload
+#step 2 : upload
 BRANCH=`hg branch`
 if [ $BRANCH == "default" ]
 then

test/hyperplane.cpp

@@ -121,7 +121,8 @@ template<typename Scalar> void lines()
     VERIFY_IS_APPROX(result, center);
 
     // check conversions between two types of lines
-    CoeffsType converted_coeffs(HLine(PLine(line_u)).coeffs());
+    PLine pl(line_u); // gcc 3.3 will commit suicide if we don't name this variable
+    CoeffsType converted_coeffs(HLine(pl).coeffs());
     converted_coeffs *= line_u.coeffs()(0)/converted_coeffs(0);
     VERIFY(line_u.coeffs().isApprox(converted_coeffs));
   }

test/qtvector.cpp

@@ -26,10 +26,12 @@
 #define EIGEN_WORK_AROUND_QT_BUG_CALLING_WRONG_OPERATOR_NEW_FIXED_IN_QT_4_5
 
 #include "main.h"
-#include <QtCore/QVector>
+
 #include <Eigen/Geometry>
 #include <Eigen/QtAlignedMalloc>
 
+#include <QtCore/QVector>
+
 template<typename MatrixType>
 void check_qtvector_matrix(const MatrixType& m)
 {

test/svd.cpp

@@ -95,5 +95,8 @@ void test_svd()
     // complex are not implemented yet
 //     CALL_SUBTEST( svd(MatrixXcd(6,6)) );
 //     CALL_SUBTEST( svd(MatrixXcf(3,3)) );
+    SVD<MatrixXf> s;
+    MatrixXf m = MatrixXf::Random(10,1);
+    s.compute(m);
   }
 }

test/visitor.cpp

@@ -40,7 +40,7 @@ template<typename MatrixType> void matrixVisitor(const MatrixType& p)
         m(i) = ei_random<Scalar>();
   
   Scalar minc = Scalar(1000), maxc = Scalar(-1000);
-  int minrow,mincol,maxrow,maxcol;
+  int minrow=0,mincol=0,maxrow=0,maxcol=0;
   for(int j = 0; j < cols; j++)
   for(int i = 0; i < rows; i++)
   {
@@ -86,7 +86,7 @@ template<typename VectorType> void vectorVisitor(const VectorType& w)
         v(i) = ei_random<Scalar>();
   
   Scalar minc = Scalar(1000), maxc = Scalar(-1000);
-  int minidx,maxidx;
+  int minidx=0,maxidx=0;
   for(int i = 0; i < size; i++)
   {
     if(v(i) < minc)