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move sparse solvers from unsupported/ to main Eigen/ and remove the "not stable yet" warning

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Gael Guennebaud
2011-11-12 14:11:27 +01:00
parent dcb66d6b40
commit 53fa851724
62 changed files with 206 additions and 1336 deletions
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6
Eigen/src/SparseCholesky/CMakeLists.txt Normal file
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FILE(GLOB Eigen_SparseCholesky_SRCS "*.h")
INSTALL(FILES
${Eigen_SparseCholesky_SRCS}
DESTINATION ${INCLUDE_INSTALL_DIR}/Eigen/src/SparseCholesky COMPONENT Devel
)

803
Eigen/src/SparseCholesky/SimplicialCholesky.h Normal file
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// This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2008-2010 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// Eigen is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 3 of the License, or (at your option) any later version.
//
// Alternatively, you can redistribute it and/or
// modify it under the terms of the GNU General Public License as
// published by the Free Software Foundation; either version 2 of
// the License, or (at your option) any later version.
//
// Eigen is distributed in the hope that it will be useful, but WITHOUT ANY
// WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License or the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License and a copy of the GNU General Public License along with
// Eigen. If not, see <http://www.gnu.org/licenses/>.
/*
NOTE: the _symbolic, and _numeric functions has been adapted from
the LDL library:
LDL Copyright (c) 2005 by Timothy A. Davis. All Rights Reserved.
LDL License:
Your use or distribution of LDL or any modified version of
LDL implies that you agree to this License.
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 2.1 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
USA
Permission is hereby granted to use or copy this program under the
terms of the GNU LGPL, provided that the Copyright, this License,
and the Availability of the original version is retained on all copies.
User documentation of any code that uses this code or any modified
version of this code must cite the Copyright, this License, the
Availability note, and "Used by permission." Permission to modify
the code and to distribute modified code is granted, provided the
Copyright, this License, and the Availability note are retained,
and a notice that the code was modified is included.
*/
#ifndef EIGEN_SIMPLICIAL_CHOLESKY_H
#define EIGEN_SIMPLICIAL_CHOLESKY_H
enum SimplicialCholeskyMode {
SimplicialCholeskyLLt,
SimplicialCholeskyLDLt
};
/** \brief A direct sparse Cholesky factorizations
*
* These classes provide LL^T and LDL^T Cholesky factorizations of sparse matrices that are
* selfadjoint and positive definite. The factorization allows for solving A.X = B where
* X and B can be either dense or sparse.
*
* \tparam _MatrixType the type of the sparse matrix A, it must be a SparseMatrix<>
* \tparam _UpLo the triangular part that will be used for the computations. It can be Lower
* or Upper. Default is Lower.
*
*/
template<typename Derived>
class SimplicialCholeskyBase
{
public:
typedef typename internal::traits<Derived>::MatrixType MatrixType;
enum { UpLo = internal::traits<Derived>::UpLo };
typedef typename MatrixType::Scalar Scalar;
typedef typename MatrixType::RealScalar RealScalar;
typedef typename MatrixType::Index Index;
typedef SparseMatrix<Scalar,ColMajor,Index> CholMatrixType;
typedef Matrix<Scalar,Dynamic,1> VectorType;
public:
SimplicialCholeskyBase()
: m_info(Success), m_isInitialized(false)
{}
SimplicialCholeskyBase(const MatrixType& matrix)
: m_info(Success), m_isInitialized(false)
{
compute(matrix);
}
~SimplicialCholeskyBase()
{
}
Derived& derived() { return *static_cast<Derived*>(this); }
const Derived& derived() const { return *static_cast<const Derived*>(this); }
inline Index cols() const { return m_matrix.cols(); }
inline Index rows() const { return m_matrix.rows(); }
/** \brief Reports whether previous computation was successful.
*
* \returns \c Success if computation was succesful,
* \c NumericalIssue if the matrix.appears to be negative.
*/
ComputationInfo info() const
{
eigen_assert(m_isInitialized && "Decomposition is not initialized.");
return m_info;
}
/** Computes the sparse Cholesky decomposition of \a matrix */
Derived& compute(const MatrixType& matrix)
{
derived().analyzePattern(matrix);
derived().factorize(matrix);
return derived();
}
/** \returns the solution x of \f$ A x = b \f$ using the current decomposition of A.
*
* \sa compute()
*/
template<typename Rhs>
inline const internal::solve_retval<SimplicialCholeskyBase, Rhs>
solve(const MatrixBase<Rhs>& b) const
{
eigen_assert(m_isInitialized && "Simplicial LLt or LDLt is not initialized.");
eigen_assert(rows()==b.rows()
&& "SimplicialCholeskyBase::solve(): invalid number of rows of the right hand side matrix b");
return internal::solve_retval<SimplicialCholeskyBase, Rhs>(*this, b.derived());
}
/** \returns the solution x of \f$ A x = b \f$ using the current decomposition of A.
*
* \sa compute()
*/
template<typename Rhs>
inline const internal::sparse_solve_retval<SimplicialCholeskyBase, Rhs>
solve(const SparseMatrixBase<Rhs>& b) const
{
eigen_assert(m_isInitialized && "Simplicial LLt or LDLt is not initialized.");
eigen_assert(rows()==b.rows()
&& "SimplicialCholesky::solve(): invalid number of rows of the right hand side matrix b");
return internal::sparse_solve_retval<SimplicialCholeskyBase, Rhs>(*this, b.derived());
}
/** \returns the permutation P
* \sa permutationPinv() */
const PermutationMatrix<Dynamic,Dynamic,Index>& permutationP() const
{ return m_P; }
/** \returns the inverse P^-1 of the permutation P
* \sa permutationP() */
const PermutationMatrix<Dynamic,Dynamic,Index>& permutationPinv() const
{ return m_Pinv; }
#ifndef EIGEN_PARSED_BY_DOXYGEN
/** \internal */
template<typename Stream>
void dumpMemory(Stream& s)
{
int total = 0;
s << " L: " << ((total+=(m_matrix.cols()+1) * sizeof(int) + m_matrix.nonZeros()*(sizeof(int)+sizeof(Scalar))) >> 20) << "Mb" << "\n";
s << " diag: " << ((total+=m_diag.size() * sizeof(Scalar)) >> 20) << "Mb" << "\n";
s << " tree: " << ((total+=m_parent.size() * sizeof(int)) >> 20) << "Mb" << "\n";
s << " nonzeros: " << ((total+=m_nonZerosPerCol.size() * sizeof(int)) >> 20) << "Mb" << "\n";
s << " perm: " << ((total+=m_P.size() * sizeof(int)) >> 20) << "Mb" << "\n";
s << " perm^-1: " << ((total+=m_Pinv.size() * sizeof(int)) >> 20) << "Mb" << "\n";
s << " TOTAL: " << (total>> 20) << "Mb" << "\n";
}
/** \internal */
template<typename Rhs,typename Dest>
void _solve(const MatrixBase<Rhs> &b, MatrixBase<Dest> &dest) const
{
eigen_assert(m_factorizationIsOk && "The decomposition is not in a valid state for solving, you must first call either compute() or symbolic()/numeric()");
eigen_assert(m_matrix.rows()==b.rows());
if(m_info!=Success)
return;
if(m_P.size()>0)
dest = m_Pinv * b;
else
dest = b;
if(m_matrix.nonZeros()>0) // otherwise L==I
derived().matrixL().solveInPlace(dest);
if(m_diag.size()>0)
dest = m_diag.asDiagonal().inverse() * dest;
if (m_matrix.nonZeros()>0) // otherwise I==I
derived().matrixU().solveInPlace(dest);
if(m_P.size()>0)
dest = m_P * dest;
}
/** \internal */
template<typename Rhs, typename DestScalar, int DestOptions, typename DestIndex>
void _solve_sparse(const Rhs& b, SparseMatrix<DestScalar,DestOptions,DestIndex> &dest) const
{
eigen_assert(m_factorizationIsOk && "The decomposition is not in a valid state for solving, you must first call either compute() or symbolic()/numeric()");
eigen_assert(m_matrix.rows()==b.rows());
// we process the sparse rhs per block of NbColsAtOnce columns temporarily stored into a dense matrix.
static const int NbColsAtOnce = 4;
int rhsCols = b.cols();
int size = b.rows();
Eigen::Matrix<DestScalar,Dynamic,Dynamic> tmp(size,rhsCols);
for(int k=0; k<rhsCols; k+=NbColsAtOnce)
{
int actualCols = std::min<int>(rhsCols-k, NbColsAtOnce);
tmp.leftCols(actualCols) = b.middleCols(k,actualCols);
tmp.leftCols(actualCols) = derived().solve(tmp.leftCols(actualCols));
dest.middleCols(k,actualCols) = tmp.leftCols(actualCols).sparseView();
}
}
#endif // EIGEN_PARSED_BY_DOXYGEN
protected:
template<bool DoLDLt>
void factorize(const MatrixType& a);
void analyzePattern(const MatrixType& a, bool doLDLt);
/** keeps off-diagonal entries; drops diagonal entries */
struct keep_diag {
inline bool operator() (const Index& row, const Index& col, const Scalar&) const
{
return row!=col;
}
};
mutable ComputationInfo m_info;
bool m_isInitialized;
bool m_factorizationIsOk;
bool m_analysisIsOk;
CholMatrixType m_matrix;
VectorType m_diag; // the diagonal coefficients (LDLt mode)
VectorXi m_parent; // elimination tree
VectorXi m_nonZerosPerCol;
PermutationMatrix<Dynamic,Dynamic,Index> m_P; // the permutation
PermutationMatrix<Dynamic,Dynamic,Index> m_Pinv; // the inverse permutation
};
template<typename _MatrixType, int _UpLo = Lower> class SimplicialLLt;
template<typename _MatrixType, int _UpLo = Lower> class SimplicialLDLt;
template<typename _MatrixType, int _UpLo = Lower> class SimplicialCholesky;
namespace internal {
template<typename _MatrixType, int _UpLo> struct traits<SimplicialLLt<_MatrixType,_UpLo> >
{
typedef _MatrixType MatrixType;
enum { UpLo = _UpLo };
typedef typename MatrixType::Scalar Scalar;
typedef typename MatrixType::Index Index;
typedef SparseMatrix<Scalar, ColMajor, Index> CholMatrixType;
typedef SparseTriangularView<CholMatrixType, Eigen::Lower> MatrixL;
typedef SparseTriangularView<typename CholMatrixType::AdjointReturnType, Eigen::Upper> MatrixU;
inline static MatrixL getL(const MatrixType& m) { return m; }
inline static MatrixU getU(const MatrixType& m) { return m.adjoint(); }
};
//template<typename _MatrixType> struct traits<SimplicialLLt<_MatrixType,Upper> >
//{
// typedef _MatrixType MatrixType;
// enum { UpLo = Upper };
// typedef typename MatrixType::Scalar Scalar;
// typedef typename MatrixType::Index Index;
// typedef SparseMatrix<Scalar, ColMajor, Index> CholMatrixType;
// typedef TriangularView<CholMatrixType, Eigen::Lower> MatrixL;
// typedef TriangularView<CholMatrixType, Eigen::Upper> MatrixU;
// inline static MatrixL getL(const MatrixType& m) { return m.adjoint(); }
// inline static MatrixU getU(const MatrixType& m) { return m; }
//};
template<typename _MatrixType,int _UpLo> struct traits<SimplicialLDLt<_MatrixType,_UpLo> >
{
typedef _MatrixType MatrixType;
enum { UpLo = _UpLo };
typedef typename MatrixType::Scalar Scalar;
typedef typename MatrixType::Index Index;
typedef SparseMatrix<Scalar, ColMajor, Index> CholMatrixType;
typedef SparseTriangularView<CholMatrixType, Eigen::UnitLower> MatrixL;
typedef SparseTriangularView<typename CholMatrixType::AdjointReturnType, Eigen::UnitUpper> MatrixU;
inline static MatrixL getL(const MatrixType& m) { return m; }
inline static MatrixU getU(const MatrixType& m) { return m.adjoint(); }
};
//template<typename _MatrixType> struct traits<SimplicialLDLt<_MatrixType,Upper> >
//{
// typedef _MatrixType MatrixType;
// enum { UpLo = Upper };
// typedef typename MatrixType::Scalar Scalar;
// typedef typename MatrixType::Index Index;
// typedef SparseMatrix<Scalar, ColMajor, Index> CholMatrixType;
// typedef TriangularView<CholMatrixType, Eigen::UnitLower> MatrixL;
// typedef TriangularView<CholMatrixType, Eigen::UnitUpper> MatrixU;
// inline static MatrixL getL(const MatrixType& m) { return m.adjoint(); }
// inline static MatrixU getU(const MatrixType& m) { return m; }
//};
template<typename _MatrixType, int _UpLo> struct traits<SimplicialCholesky<_MatrixType,_UpLo> >
{
typedef _MatrixType MatrixType;
enum { UpLo = _UpLo };
};
}
/** \class SimplicialLLt
* \brief A direct sparse LLt Cholesky factorizations
*
* This class provides a LL^T Cholesky factorizations of sparse matrices that are
* selfadjoint and positive definite. The factorization allows for solving A.X = B where
* X and B can be either dense or sparse.
*
* \tparam _MatrixType the type of the sparse matrix A, it must be a SparseMatrix<>
* \tparam _UpLo the triangular part that will be used for the computations. It can be Lower
* or Upper. Default is Lower.
*
* \sa class SimplicialLDLt
*/
template<typename _MatrixType, int _UpLo>
class SimplicialLLt : public SimplicialCholeskyBase<SimplicialLLt<_MatrixType,_UpLo> >
{
public:
typedef _MatrixType MatrixType;
enum { UpLo = _UpLo };
typedef SimplicialCholeskyBase<SimplicialLLt> Base;
typedef typename MatrixType::Scalar Scalar;
typedef typename MatrixType::RealScalar RealScalar;
typedef typename MatrixType::Index Index;
typedef SparseMatrix<Scalar,ColMajor,Index> CholMatrixType;
typedef Matrix<Scalar,Dynamic,1> VectorType;
typedef internal::traits<SimplicialLLt> Traits;
typedef typename Traits::MatrixL MatrixL;
typedef typename Traits::MatrixU MatrixU;
public:
SimplicialLLt() : Base() {}
SimplicialLLt(const MatrixType& matrix)
: Base(matrix) {}
inline const MatrixL matrixL() const {
eigen_assert(Base::m_factorizationIsOk && "Simplicial LLt not factorized");
return Traits::getL(Base::m_matrix);
}
inline const MatrixU matrixU() const {
eigen_assert(Base::m_factorizationIsOk && "Simplicial LLt not factorized");
return Traits::getU(Base::m_matrix);
}
/** Performs a symbolic decomposition on the sparcity of \a matrix.
*
* This function is particularly useful when solving for several problems having the same structure.
*
* \sa factorize()
*/
void analyzePattern(const MatrixType& a)
{
Base::analyzePattern(a, false);
}
/** Performs a numeric decomposition of \a matrix
*
* The given matrix must has the same sparcity than the matrix on which the symbolic decomposition has been performed.
*
* \sa analyzePattern()
*/
void factorize(const MatrixType& a)
{
Base::template factorize<false>(a);
}
Scalar determinant() const
{
Scalar detL = Diagonal<const CholMatrixType>(Base::m_matrix).prod();
return internal::abs2(detL);
}
};
/** \class SimplicialLDLt
* \brief A direct sparse LDLt Cholesky factorizations without square root.
*
* This class provides a LDL^T Cholesky factorizations without square root of sparse matrices that are
* selfadjoint and positive definite. The factorization allows for solving A.X = B where
* X and B can be either dense or sparse.
*
* \tparam _MatrixType the type of the sparse matrix A, it must be a SparseMatrix<>
* \tparam _UpLo the triangular part that will be used for the computations. It can be Lower
* or Upper. Default is Lower.
*
* \sa class SimplicialLLt
*/
template<typename _MatrixType, int _UpLo>
class SimplicialLDLt : public SimplicialCholeskyBase<SimplicialLDLt<_MatrixType,_UpLo> >
{
public:
typedef _MatrixType MatrixType;
enum { UpLo = _UpLo };
typedef SimplicialCholeskyBase<SimplicialLDLt> Base;
typedef typename MatrixType::Scalar Scalar;
typedef typename MatrixType::RealScalar RealScalar;
typedef typename MatrixType::Index Index;
typedef SparseMatrix<Scalar,ColMajor,Index> CholMatrixType;
typedef Matrix<Scalar,Dynamic,1> VectorType;
typedef internal::traits<SimplicialLDLt> Traits;
typedef typename Traits::MatrixL MatrixL;
typedef typename Traits::MatrixU MatrixU;
public:
SimplicialLDLt() : Base() {}
SimplicialLDLt(const MatrixType& matrix)
: Base(matrix) {}
inline const VectorType vectorD() const {
eigen_assert(Base::m_factorizationIsOk && "Simplicial LDLt not factorized");
return Base::m_diag;
}
inline const MatrixL matrixL() const {
eigen_assert(Base::m_factorizationIsOk && "Simplicial LDLt not factorized");
return Traits::getL(Base::m_matrix);
}
inline const MatrixU matrixU() const {
eigen_assert(Base::m_factorizationIsOk && "Simplicial LDLt not factorized");
return Traits::getU(Base::m_matrix);
}
/** Performs a symbolic decomposition on the sparcity of \a matrix.
*
* This function is particularly useful when solving for several problems having the same structure.
*
* \sa factorize()
*/
void analyzePattern(const MatrixType& a)
{
Base::analyzePattern(a, true);
}
/** Performs a numeric decomposition of \a matrix
*
* The given matrix must has the same sparcity than the matrix on which the symbolic decomposition has been performed.
*
* \sa analyzePattern()
*/
void factorize(const MatrixType& a)
{
Base::template factorize<true>(a);
}
Scalar determinant() const
{
return Base::m_diag.prod();
}
};
/** \class SimplicialCholesky
* \deprecated use SimplicialLDLt or class SimplicialLLt
* \sa class SimplicialLDLt, class SimplicialLLt
*/
template<typename _MatrixType, int _UpLo>
class SimplicialCholesky : public SimplicialCholeskyBase<SimplicialCholesky<_MatrixType,_UpLo> >
{
public:
typedef _MatrixType MatrixType;
enum { UpLo = _UpLo };
typedef SimplicialCholeskyBase<SimplicialCholesky> Base;
typedef typename MatrixType::Scalar Scalar;
typedef typename MatrixType::RealScalar RealScalar;
typedef typename MatrixType::Index Index;
typedef SparseMatrix<Scalar,ColMajor,Index> CholMatrixType;
typedef Matrix<Scalar,Dynamic,1> VectorType;
typedef internal::traits<SimplicialCholesky> Traits;
typedef internal::traits<SimplicialLDLt<MatrixType,UpLo> > LDLtTraits;
typedef internal::traits<SimplicialLLt<MatrixType,UpLo> > LLtTraits;
public:
SimplicialCholesky() : Base(), m_LDLt(true) {}
SimplicialCholesky(const MatrixType& matrix)
: Base(), m_LDLt(true)
{
Base::compute(matrix);
}
SimplicialCholesky& setMode(SimplicialCholeskyMode mode)
{
switch(mode)
{
case SimplicialCholeskyLLt:
m_LDLt = false;
break;
case SimplicialCholeskyLDLt:
m_LDLt = true;
break;
default:
break;
}
return *this;
}
inline const VectorType vectorD() const {
eigen_assert(Base::m_factorizationIsOk && "Simplicial Cholesky not factorized");
return Base::m_diag;
}
inline const CholMatrixType rawMatrix() const {
eigen_assert(Base::m_factorizationIsOk && "Simplicial Cholesky not factorized");
return Base::m_matrix;
}
/** Performs a symbolic decomposition on the sparcity of \a matrix.
*
* This function is particularly useful when solving for several problems having the same structure.
*
* \sa factorize()
*/
void analyzePattern(const MatrixType& a)
{
Base::analyzePattern(a, m_LDLt);
}
/** Performs a numeric decomposition of \a matrix
*
* The given matrix must has the same sparcity than the matrix on which the symbolic decomposition has been performed.
*
* \sa analyzePattern()
*/
void factorize(const MatrixType& a)
{
if(m_LDLt)
Base::template factorize<true>(a);
else
Base::template factorize<false>(a);
}
/** \internal */
template<typename Rhs,typename Dest>
void _solve(const MatrixBase<Rhs> &b, MatrixBase<Dest> &dest) const
{
eigen_assert(Base::m_factorizationIsOk && "The decomposition is not in a valid state for solving, you must first call either compute() or symbolic()/numeric()");
eigen_assert(Base::m_matrix.rows()==b.rows());
if(Base::m_info!=Success)
return;
if(Base::m_P.size()>0)
dest = Base::m_Pinv * b;
else
dest = b;
if(Base::m_matrix.nonZeros()>0) // otherwise L==I
{
if(m_LDLt)
LDLtTraits::getL(Base::m_matrix).solveInPlace(dest);
else
LLtTraits::getL(Base::m_matrix).solveInPlace(dest);
}
if(Base::m_diag.size()>0)
dest = Base::m_diag.asDiagonal().inverse() * dest;
if (Base::m_matrix.nonZeros()>0) // otherwise I==I
{
if(m_LDLt)
LDLtTraits::getU(Base::m_matrix).solveInPlace(dest);
else
LLtTraits::getU(Base::m_matrix).solveInPlace(dest);
}
if(Base::m_P.size()>0)
dest = Base::m_P * dest;
}
Scalar determinant() const
{
if(m_LDLt)
{
return Base::m_diag.prod();
}
else
{
Scalar detL = Diagonal<const CholMatrixType>(Base::m_matrix).prod();
return internal::abs2(detL);
}
}
protected:
bool m_LDLt;
};
template<typename Derived>
void SimplicialCholeskyBase<Derived>::analyzePattern(const MatrixType& a, bool doLDLt)
{
eigen_assert(a.rows()==a.cols());
const Index size = a.rows();
m_matrix.resize(size, size);
m_parent.resize(size);
m_nonZerosPerCol.resize(size);
ei_declare_aligned_stack_constructed_variable(Index, tags, size, 0);
// TODO allows to configure the permutation
{
CholMatrixType C;
C = a.template selfadjointView<UpLo>();
// remove diagonal entries:
C.prune(keep_diag());
internal::minimum_degree_ordering(C, m_P);
}
if(m_P.size()>0)
m_Pinv = m_P.inverse();
else
m_Pinv.resize(0);
SparseMatrix<Scalar,ColMajor,Index> ap(size,size);
ap.template selfadjointView<Upper>() = a.template selfadjointView<UpLo>().twistedBy(m_Pinv);
for(Index k = 0; k < size; ++k)
{
/* L(k,:) pattern: all nodes reachable in etree from nz in A(0:k-1,k) */
m_parent[k] = -1; /* parent of k is not yet known */
tags[k] = k; /* mark node k as visited */
m_nonZerosPerCol[k] = 0; /* count of nonzeros in column k of L */
for(typename CholMatrixType::InnerIterator it(ap,k); it; ++it)
{
Index i = it.index();
if(i < k)
{
/* follow path from i to root of etree, stop at flagged node */
for(; tags[i] != k; i = m_parent[i])
{
/* find parent of i if not yet determined */
if (m_parent[i] == -1)
m_parent[i] = k;
m_nonZerosPerCol[i]++; /* L (k,i) is nonzero */
tags[i] = k; /* mark i as visited */
}
}
}
}
/* construct Lp index array from m_nonZerosPerCol column counts */
Index* Lp = m_matrix._outerIndexPtr();
Lp[0] = 0;
for(Index k = 0; k < size; ++k)
Lp[k+1] = Lp[k] + m_nonZerosPerCol[k] + (doLDLt ? 0 : 1);
m_matrix.resizeNonZeros(Lp[size]);
m_isInitialized = true;
m_info = Success;
m_analysisIsOk = true;
m_factorizationIsOk = false;
}
template<typename Derived>
template<bool DoLDLt>
void SimplicialCholeskyBase<Derived>::factorize(const MatrixType& a)
{
eigen_assert(m_analysisIsOk && "You must first call analyzePattern()");
eigen_assert(a.rows()==a.cols());
const Index size = a.rows();
eigen_assert(m_parent.size()==size);
eigen_assert(m_nonZerosPerCol.size()==size);
const Index* Lp = m_matrix._outerIndexPtr();
Index* Li = m_matrix._innerIndexPtr();
Scalar* Lx = m_matrix._valuePtr();
ei_declare_aligned_stack_constructed_variable(Scalar, y, size, 0);
ei_declare_aligned_stack_constructed_variable(Index, pattern, size, 0);
ei_declare_aligned_stack_constructed_variable(Index, tags, size, 0);
SparseMatrix<Scalar,ColMajor,Index> ap(size,size);
ap.template selfadjointView<Upper>() = a.template selfadjointView<UpLo>().twistedBy(m_Pinv);
bool ok = true;
m_diag.resize(DoLDLt ? size : 0);
for(Index k = 0; k < size; ++k)
{
// compute nonzero pattern of kth row of L, in topological order
y[k] = 0.0; // Y(0:k) is now all zero
Index top = size; // stack for pattern is empty
tags[k] = k; // mark node k as visited
m_nonZerosPerCol[k] = 0; // count of nonzeros in column k of L
for(typename MatrixType::InnerIterator it(ap,k); it; ++it)
{
Index i = it.index();
if(i <= k)
{
y[i] += internal::conj(it.value()); /* scatter A(i,k) into Y (sum duplicates) */
Index len;
for(len = 0; tags[i] != k; i = m_parent[i])
{
pattern[len++] = i; /* L(k,i) is nonzero */
tags[i] = k; /* mark i as visited */
}
while(len > 0)
pattern[--top] = pattern[--len];
}
}
/* compute numerical values kth row of L (a sparse triangular solve) */
Scalar d = y[k]; // get D(k,k) and clear Y(k)
y[k] = 0.0;
for(; top < size; ++top)
{
Index i = pattern[top]; /* pattern[top:n-1] is pattern of L(:,k) */
Scalar yi = y[i]; /* get and clear Y(i) */
y[i] = 0.0;
/* the nonzero entry L(k,i) */
Scalar l_ki;
if(DoLDLt)
l_ki = yi / m_diag[i];
else
yi = l_ki = yi / Lx[Lp[i]];
Index p2 = Lp[i] + m_nonZerosPerCol[i];
Index p;
for(p = Lp[i] + (DoLDLt ? 0 : 1); p < p2; ++p)
y[Li[p]] -= internal::conj(Lx[p]) * yi;
d -= l_ki * internal::conj(yi);
Li[p] = k; /* store L(k,i) in column form of L */
Lx[p] = l_ki;
++m_nonZerosPerCol[i]; /* increment count of nonzeros in col i */
}
if(DoLDLt)
m_diag[k] = d;
else
{
Index p = Lp[k]+m_nonZerosPerCol[k]++;
Li[p] = k ; /* store L(k,k) = sqrt (d) in column k */
Lx[p] = internal::sqrt(d) ;
}
if(d == Scalar(0))
{
ok = false; /* failure, D(k,k) is zero */
break;
}
}
m_info = ok ? Success : NumericalIssue;
m_factorizationIsOk = true;
}
namespace internal {
template<typename Derived, typename Rhs>
struct solve_retval<SimplicialCholeskyBase<Derived>, Rhs>
: solve_retval_base<SimplicialCholeskyBase<Derived>, Rhs>
{
typedef SimplicialCholeskyBase<Derived> Dec;
EIGEN_MAKE_SOLVE_HELPERS(Dec,Rhs)
template<typename Dest> void evalTo(Dest& dst) const
{
dec().derived()._solve(rhs(),dst);
}
};
template<typename Derived, typename Rhs>
struct sparse_solve_retval<SimplicialCholeskyBase<Derived>, Rhs>
: sparse_solve_retval_base<SimplicialCholeskyBase<Derived>, Rhs>
{
typedef SimplicialCholeskyBase<Derived> Dec;
EIGEN_MAKE_SPARSE_SOLVE_HELPERS(Dec,Rhs)
template<typename Dest> void evalTo(Dest& dst) const
{
dec().derived()._solve_sparse(rhs(),dst);
}
};
}
#endif // EIGEN_SIMPLICIAL_CHOLESKY_H